Gallery
From wubrowse wiki
Noteworthy browser sessions in the forms of parameterized URL links. Each link has two versions from both public and test servers.
Contents
Embedding
http://egg.wustl.edu/+/embed-test/ http://egg.wustl.edu/+/embed
Public hub
http://epgg-test.wustl.edu/browser/?genome=hg19&publichub=roadmap http://epigenomegateway.wustl.edu/browser/?genome=hg19&publichub=roadmap http://epgg-test.wustl.edu/browser/?genome=hg19&publichub=fimo http://epigenomegateway.wustl.edu/browser/?genome=hg19&publichub=fimo
Datahub
http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=https://vizhub.wustl.edu/hubSample/hg19/hub.json http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=https://vizhub.wustl.edu/hubSample/hg19/hub.json http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=https://vizhub.wustl.edu/hubSample/hg19/hub.error http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=https://vizhub.wustl.edu/hubSample/hg19/hub.error http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=https://vizhub.wustl.edu/hubSample/hg19/hub.experiment http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/hub.experiment http://epgg-test.wustl.edu/browser/?genome=hg19&datahub_ucsc=http://zlab.umassmed.edu/zlab/publications/UMassMedZHub/hub.txt http://epgg-test.wustl.edu/browser/?genome=hg19&datahub_ucsc=http://zlab.umassmed.edu/zlab/publications/UMassMedZHub/hub.txt
Metadata
Using private metadata vocabulary http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/temp/hubwithPrivateMd http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/temp/hubwithPrivateMd Using one shared metadata vocabulary http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/temp/hubwithOneMd http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/temp/hubwithOneMd Using two shared metadata vocabularies and one private vocabulary http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/temp/hubwithTwoMd http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/temp/hubwithTwoMd Error handling http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/temp/hubwithWrongMd http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/temp/hubwithWrongMd
BAM
36bp single end http://epgg-test.wustl.edu/browser/?genome=hg19&bam=xxx,https://vizhub.wustl.edu/hubSample/hg19/wgEncodeHaibTfbsA549Ctcfsc5916Pcr1xDex100nmAlnRep1.bam,full http://epigenomegateway.wustl.edu/browser/?genome=hg19&bam=xx,https://vizhub.wustl.edu/hubSample/hg19/wgEncodeHaibTfbsA549Ctcfsc5916Pcr1xDex100nmAlnRep1.bam,full 75bp single end with split reads from RNA splicing http://epgg-test.wustl.edu/browser/?genome=hg19&bam=xxx,https://vizhub.wustl.edu/hubSample/hg19/wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep1V2.bam,full http://epigenomegateway.wustl.edu/browser/?genome=hg19&bam=xxx,https://vizhub.wustl.edu/hubSample/hg19/wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep1V2.bam,full 20bp paired end http://epgg-test.wustl.edu/browser/?genome=hg19&bam=xxx,https://vizhub.wustl.edu/hubSample/hg19/wgEncodeGisChiaPetMcf7CtcfAlnRep1.bam,full http://epigenomegateway.wustl.edu/browser/?genome=hg19&bam=xxx,https://vizhub.wustl.edu/hubSample/hg19/wgEncodeGisChiaPetMcf7CtcfAlnRep1.bam,thin&coordinate=chr7:27172688-27179200
matplot track
http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/hub.json http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/hub.json
methylC track
http://epgg-test.wustl.edu/browser/?genome=hg18&publichub=methylome http://epigenomegateway.wustl.edu/browser/?genome=hg18&publichub=methylome http://epgg-test.wustl.edu/browser/?genome=hg18&publichub=methylome&coordinate=chr1:154778219-159041391 http://epigenomegateway.wustl.edu/browser/?genome=hg18&publichub=methylome&coordinate=chr1:154778219-159041391 DHX9 with large amount of genebody CHG/CHH methylation in H1ES http://epgg-test.wustl.edu/browser/?genome=hg18&publichub=methylome&coordinate=chr1:181053852-181148747 http://epigenomegateway.wustl.edu/browser/?genome=hg18&publichub=methylome&coordinate=chr1:181053852-181148747
Split panel
http://epgg-test.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/hub.json&splinters=chr5:16310920-16572497&coordinate=chr7:23613718-23689364 http://epigenomegateway.wustl.edu/browser/?genome=hg19&datahub=http://vizhub.wustl.edu/hubSample/hg19/hub.json&splinters=chr5:16310920-16572497&coordinate=chr7:23613718-23689364
Circlet view
http://epgg-test.wustl.edu/browser/?genome=hg19&longrange=xxx,http://vizhub.wustl.edu/hubSample/hg19/K562POL2.gz,full&coordinate=chr1:144393992-144775568&gftk=refGene,full http://epigenomegateway.wustl.edu/browser/?genome=hg19&longrange=xxx,http://vizhub.wustl.edu/hubSample/hg19/K562POL2.gz,full&coordinate=chr1:144393992-144775568&gftk=refGene,full
LD
http://epgg-test.wustl.edu/browser/?genome=hg18&gftk=hapmap_r27_MEX,show http://epigenomegateway.wustl.edu/browser/?genome=hg18&gftk=hapmap_r27_MEX,show
