Version History

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  1. v43: improved rendering of HiC tracks and yeast genome added (Thursday, Jun 22, 2017)
  2. v42: bigWig and bigBed support with libBigWig (Monday, Mar 20, 2017)
  3. v41: HiC track, retina display and image track prototype (Tuesday, Oct 4, 2016)
  4. v40: performance improvement (Wednesday, Apr 29, 2015)
  5. v39: new metadata (Wednesday, Jul 2, 2014)
  6. v38: matplot (Monday, May 19, 2014)
  7. v37: More options and bug fixes (Wednesday, April 9, 2014)
  8. v36: upload hammock-format file (Friday, April 4, 2014)
  9. v35: hammock tracks for richly annotated genomic features (Saturday, March 22, 2014)
  10. v34 (2 of 2): convenient coordinate choices (Friday, March 14, 2014)
  11. v34 (1 of 2): Genomes of human (hg38), and Guinea pig (cavPor3) (Friday, March 14, 2014)
  12. v33 (2 of 2): hide "undesirable items" from a track! (Friday, March 7, 2014)
  13. v33 (1 of 2): upload long-range interaction data (Friday, March 7, 2014)
  14. v32: shared metadata (Friday, January 31, 2014)
  15. v31 (3 of 3): File upload (Thursday, January 16, 2014)
  16. v31 (2 of 3): Sessions (Thursday, January 16, 2014)
  17. v31 (1 of 3): Improved user interface (Thursday, January 16, 2014)
  18. v30: custom gene tracks (Saturday, November 30, 2013)
  19. v29 (4 of 4): the methylC track (Sunday, November 24, 2013)
  20. v29 (3 of 4): delete custom tracks (Sunday, November 24, 2013)
  21. v29 (2 of 4): displaying track hubs from UCSC Genome Browser (Sunday, November 24, 2013)
  22. v29 (1 of 4): access HTTPS resources, including Dropbox (Sunday, November 24, 2013)
  23. v28 (2 of 2): track configuration (Tuesday, November 19, 2013)
  24. v28 (1 of 2): multiple track selection (Tuesday, November 19, 2013)
  25. v27 (3 of 3): custom track listing (Saturday, November 9, 2013)
  26. v27 (2 of 3): make screenshot for Genome snapshot (Saturday, November 9, 2013)
  27. v27 (1 of 3): GENCODE V17 track for the human genome (Saturday, November 9, 2013)
  28. v26 (3 of 3): smoothing curves (Thursday, October 31, 2013)
  29. v26 (2 of 3): RepeatMasker tracks (Thursday, October 31, 2013)
  30. v26 (1 of 3): SNP track (Thursday, October 31, 2013)
  31. v25: new display methods for methylC-seq and RRBS experiments (Wednesday, October 9, 2013)
  32. v24 (3 of 3): facet panel (Monday, September 23, 2013)
  33. v24 (2 of 3): JSON datahub format (Monday, September 23, 2013)
  34. v24 (1 of 3): new genomes (Monday, September 23, 2013)
  35. v23: custom categorical track (Saturday, August 3, 2013)
  36. v22 (3 of 3): better track search, and information display (Sunday, July 28, 2013)
  37. v22 (2 of 3): public datahubs (Sunday, July 28, 2013)
  38. v22 (1 of 3): call super enhancer using ROSE (Sunday, July 28, 2013)
  39. v21: Creating and managing multiple gene sets (Monday, July 22, 2013)
  40. v20 (3 of 3): refresh cache of custom tracks (Friday, July 5, 2013)
  41. v20 (2 of 3): embedding browser (Friday, July 5, 2013)
  42. v20 (1 of 3): dual genome display (Friday, July 5, 2013)
  43. Split to get a new panel (Friday, June 14, 2013)
  44. v19: navigation and apps buttons, adjust browser panel width (Friday, June 14, 2013)
  45. v18: new page look, BAM file support (Friday, May 31, 2013)
  46. v17: Circlet View (Sunday, April 7, 2013)
  47. v16: Quick load, animated zoom, and bug fixes! (Thursday, March 28, 2013)
  48. v15: search for tracks, search for KEGG pathway (Friday, March 1, 2013)
  49. v14: alternative gene models viewing and selection (Friday, February 8, 2013)
  50. URL parameter specification (effective v13) (Thursday, December 27, 2012)
  51. v13: enhanced user interface, architectural overhaul (Thursday, December 27, 2012)
  52. v12 minor release: S. pombe genome, bug fixes (Wednesday, November 7, 2012)
  53. v11: search track by GEO accession, and bug fixes (Tuesday, September 25, 2012)
  54. v10 minor update: bug fix and more scrolling options (Sunday, September 23, 2012)
  55. v9 major update: continued bigWig support, new custom track UI, bug fix (Sunday, September 16, 2012)
  56. Prepare custom long-range interaction track (Saturday, September 15, 2012)
  57. v8 major update - tabix indexing, chromHMM tracks (Sunday, September 9, 2012)
  58. Generate tabix file from SAM/BAM file (Sunday, September 9, 2012)
  59. Prepare custom track of annotation data (or "bed" track) (Sunday, September 9, 2012)
  60. Prepare custom track of numerical data (Sunday, September 9, 2012)
  61. v7 major update - Long Range interaction view, SVG output (Monday, August 20, 2012)
  62. v6 release - major bug fix (Monday, June 4, 2012)
  63. v5 release - gene indicating function (Saturday, June 2, 2012)
  64. v4 code release: faster gene track rendering (Tuesday, May 29, 2012)
  65. v3 code release - Maize genome supported (Monday, May 21, 2012)
  66. Variant of BED file format (and how to make it) (Sunday, May 20, 2012)
  67. v2 code release - URL parsing and persistent hyperlinks (Sunday, May 6, 2012)
  68. v1 - FIRST release of source code (Sunday, April 29, 2012)
  69. Bug fix report (Wednesday, April 25, 2012)
  70. Improved interface for Gene Plot function (Wednesday, April 18, 2012)
  71. New color palette (Sunday, April 15, 2012)
  72. The "overview wiggle track" (Friday, April 13, 2012)
  73. The data hub (Monday, April 2, 2012)
  74. Enhanced track information display (Friday, March 23, 2012)
  75. Enhanced chromosome ideogram graph (Sunday, March 18, 2012)
  76. Genome selector on page start up (Thursday, March 15, 2012)
  77. Somewhat unified method to rearrange items in a list (Wednesday, March 14, 2012)
  78. Minor improvements to Gene Set View (Thursday, March 8, 2012)
  79. Scaffold sequence configuration function (Thursday, March 8, 2012)
  80. Showing data distribution using Gene Plot (Friday, February 3, 2012)
  81. bigBed generator as an "App" (Wednesday, January 25, 2012)
  82. Enhanced scale bar and ruler (Wednesday, January 25, 2012)
  83. New metadata browsing and management (Monday, January 23, 2012)
  84. Problem with Gene Plot chart rendering fixed (Wednesday, January 18, 2012)
  85. Minor improvement to Gene Plot (Tuesday, January 17, 2012)
  86. Minor extension to Bird's Eye View (Tuesday, January 17, 2012)
  87. New look of floating toolbox (Tuesday, January 17, 2012)
  88. New interface for selecting gene structure (Tuesday, December 20, 2011)
  89. New interface about track selection (Tuesday, December 20, 2011)
  90. Genome-wide statistics and visual display (Thursday, December 8, 2011)
  91. New configuration methods for quantitative tracks (Wednesday, December 7, 2011)
  92. Correlation function revised (Monday, November 7, 2011)
  93. New Gene and RepeatMasker tracks (Thursday, November 3, 2011)
  94. Bird's Eye View (Monday, October 24, 2011)
  95. Floating toolbox remodeled (Monday, October 24, 2011)
  96. Sticky note (Wednesday, October 12, 2011)
  97. Heatmap configuration (Monday, October 10, 2011)
  98. User manual (Friday, September 30, 2011)
  99. Gene Plot for custom bigBed track (Thursday, September 15, 2011)
  100. Somewhat unified style on user interface (Tuesday, September 13, 2011)
  101. Get data from Gene Plot (Friday, September 9, 2011)
  102. Clustering analysis on Gene Set (Tuesday, September 6, 2011)
  103. A glimpse of what's coming (Monday, September 5, 2011)
  104. Add / remove genes for Gene Set View (Thursday, September 1, 2011)
  105. Gene Plot (Thursday, September 1, 2011)
  106. bigBed file generator (Saturday, August 27, 2011)
  107. User interface revised (Saturday, August 27, 2011)
  108. Configuring decorative tracks (Saturday, August 27, 2011)